Hey all, recently fitted my bike with new plugs(flooded the engine....

) and got a new battery cos the old one was, well, old. After putting it back together and taking it for a spin i found that i have a flat spot around 4500-5k revs which wasn't there before. It also makes a weird sound. The only thing i can say it sounds like is when you've got a paintball gun and hold the cock lever whilst pressing the trigger, really quick firing but high pitched. Its fine once you get past it though.
Its got an aftermarket can, but i doubt that has anything to do with it as it was fine before.
Ive looked at other similar posts, and it mentions cleaning the carbs, i stripped em down about 2 months ago and gave em a good clean so theres nothing blocking it......any ideas?